FastQCFastQC Report
Plate06_barcode13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenamePlate06_barcode13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18862
Total Bases33.6 Mbp
Sequence length5-51087
Mean Length1786
Median Length913
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCATACTCGTGTGAGTTTTCGCATTTATCGTGAAACGCTTTCGCGTTTT1660.88No Hit
ACTTCCATACTCGTGTGAGTTTTCGCATTTATCGTGAAACGCTTTCGCGT750.4No Hit
TTCCATACTCGTGTGAGTTTTCGCATTTATCGTGAAACGCTTTCGCGTTT400.21No Hit
ACGACTTCCATACTCGTGTGAGTTTTCGCATTTATCGTGAAACGCTTTCG350.19No Hit
ATACTCGTGTGAGTTTTCGCATTTATCGTGAAACGCTTTCGCGTTTTTCG280.15No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.13.0)